Purification, Characterization and Thermodynamic Assessment of an Alkaline Protease by Geotrichum Candidum of Dairy Origin

Document Type : Research Paper

Authors

1 Department of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan

2 Department of Bioinformatics and Biotechnology, International Islamic University, Islamabad, Pakistan

3 Aliments Bioprocédés Toxicologie Environnement (ABTE), E.A. 4651, Université de Caen Basse-Normandie, Esplanade de la Paix, CAEN Cedex, France

4 Aliments Bioprocédés Toxicologie Environnement (ABTE), E.A. 4651, Université de Caen Basse-Normandie, Esplanade de la Paix, CAEN Cedex, France

Abstract

Background: Alkaline proteases is the important group of enzymes having numerous industrial applications including dairy food formulations.
Objectives: The current study deals with the purification and characterization of an alkaline serine protease produced by Geotrichum candidum QAUGC01, isolated from indigenous fermented milk product, Dahi.
Material and Methods: In total twelve G. candidum strains were screened for their proteolytic activity by using standard protease assay. The protease production from G. candidum QAUGC01 was optimized by varying physio-chemical conditions. The protease was purified by using two-step method: ammonium sulfate precipitation and gel filtration chromatography. Protease was further characterized by studying various parameter like temperature, pH, modulators, metal ions and organic solvent. A thermodynamic study was also carried out to explore the half-life of protease.
Results: The G. candidum grew profusely at 25 °C and at an initial pH of 4.0 for 72 h of incubation producing 26.21 U/mlmaximum extracellular protease. Protease revealed that Vmax and Km was 26.25 U.ml-1.min-1 and 0.05 mg.mL-1, respectively using casein as substrate. The enzyme was stable at a temperature range (25-45 ºC) and pH (8-9). Residual enzyme activity was strongly inhibited in the presence of PMSF (7.5%). The protease could hydrolyze proteinaceous substrates, casein (98%) and BSA (95%). The thermodynamic studies explored that the half-life of the enzyme that was 106.62 min, 38.72 min and 15.71 min at 50, 60 and 70 ºC, respectively.
Conclusions: Purified protease from G. candidum GCQAU01 is an ideal candidate for industrial application.

Keywords

Main Subjects


1.           Mothe T, Sultanpuram VR. Production, purification and characterization of a thermotolerant alkaline serine protease from a novel species Bacillus caseinilyticus. 3 Biotech. 2016;6(1):53. doi: 10.1007/s13205-016-0377-y pmid: 28330122
2.           Ramamoorthy SK, Gnanakkan Aa, Kathirvel I. Response surface method to optimize the low cost medium for protease production using anchovy meal from ascidian associated Bacillus sp. GA CAS10. Afr J Biotechnol 2014;13(27):2741-2749. doi: 10.5897/ajb2014.13891
3.           Juturu V, Wu JC. Microbial cellulases: Engineering, production and applications. Renew Sustain Energy Rev. 2014;33:188-203. doi: 10.1016/j.rser.2014.01.077
4.           Rosenberg L, Lapid O, Bogdanov-Berezovsky A, Glesinger R, Krieger Y, Silberstein E, et al. Safety and efficacy of a proteolytic enzyme for enzymatic burn debridement: a preliminary report. Burns. 2004;30(8):843-850. doi: 10.1016/j.burns.2004.04.0 10 pmid: 15555800
5.           de Castro RJS, Sato HH. Production and biochemical characterization of protease from Aspergillus oryzae: An evaluation of the physical–chemical parameters using agroindustrial wastes as supports. Biocatal Agricult Biotechnol. 2014;3(3):20-25. doi: 10.1016/j.bcab.2013 .12.002
6.           Agrawal D, Patidar P, Banerjee T, Patil S. Production of alkaline protease by Penicillium sp. under SSF conditions and its application to soy protein hydrolysis. Proc Biochem. 2004;39(8):977-981. doi: 10.1016/s0032-9592(03)00212-7
7.           Imran M, Desmasures N, Vernoux J-P. Complex Microbial Communities as Part of Fermented Food Ecosystems and Beneficial Properties: CRC Press; 2012.
8.           Mounier J, Goerges S, Gelsomino R, Vancanneyt M, Vandemeulebroecke K, Hoste B, et al. Sources of the adventitious microflora of a smear-ripened cheese. J Appl Microbiol. 2006;101(3):668-681. doi: 10.1111/j.1365-2672.2006.02922.x pmid: 16907817
9.           Barkaat M. [Study of the impact of microbial diversity on nutritional and organoleptic quality of indigenous fermented milk product (Dahi)]. Islamabad, Pakistan: Quaid-i-Azam University; 2015.
10.        Chamba JF, Jamet E. Contribution to the safety assessment of technological microflora found in fermented dairy products. Int J Food Microbiol. 2008;126(3):263-266. doi: 10.1016/j.ijfoodmicro.200 7.08.001 pmid: 17900730
11.        Pottier I, Gente S, Vernoux JP, Gueguen M. Safety assessment of dairy microorganisms: Geotrichum candidum. Int J Food Microbiol. 2008;126(3):327-332. doi: 10.1016/j.ijfoodmicro.2007.08.021 pmid: 17869364
12.        Bourdichon F, Casaregola S, Farrokh C, Frisvad JC, Gerds ML, Hammes WP, et al. Food fermentations: microorganisms with technological beneficial use. Int J Food Microbiol. 2012;154(3):87-97. doi: 10.1016/j.ijfoodmicro.2011.12.030 pmid: 22257932
13.        Morel G, Sterck L, Swennen D, Marcet-Houben M, Onesime D, Levasseur A, et al. Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts. Sci Rep. 2015;5:11571. doi: 10.1038/srep11571 pmid: 26108467
14.        Vazquez S, Ruberto L, Mac Cormack W. Properties of extracellular proteases from three psychrotolerant Stenotrophomonas maltophilia isolated from Antarctic soil. Polar Biol. 2004;28(4):319-325. doi: 10.1007/s00300-004-0673-6
15.        Gueguen M, Lenoir J. Aptitude de l'espèce Geotrichum candidum à la production d'enzymes protéolytiques. Le Lait. 1975;55(543-544):145-162. doi: 10.1051/lait:19 75543-5449
16.        Kunitz N. Methods of enzymatic analysis. London: Verlag Chemic Academic press; 1965.
17.        Tsuchiya K, Nakamura Y, Sakashita H, Kimura T. Purification and characterization of a thermostable alkaline protease from alkalophilic Thermoactinomyces sp. HS682. Biosci Biotechnol Biochem. 1992;56(2):246-250. doi: 10.1271/bbb.56.246 pmid: 1368301
18.        Shaheen M, Shah AA, Hameed A, Hasan F. Influence of culture conditions on production and activity of protease from Bacillus subtilis BS1. Pak J Bot. 2008;40(5):2161-2169.
19.        Quiroga E, Priolo N, Marchese J, Barberis S. Stability of araujiain, a novel plant protease, in different organic systems. Acta Farmac Bonaerense. 2005;24(2):204.
20.        Qadar SAU, Shireen E, Iqbal S, Anwar A. Optimization of protease production from newly isolated strain of Bacillus sp. PCSIR EA-3. Indian J Biotechnol. 2009;8:286-290.
21.        Kiranmayee R, M LN. Alkaline Protease from Bacillus firmus 7728. Afr J Biotechnol. 2007;6(21):2493-2496. doi: 10.5897/ajb2007.000-2395
22.        Boutrou R, Gueguen M. Interests in Geotrichum candidum for cheese technology. Int J Food Microbiol. 2005;102(1):1-20. doi: 10.1016/j.ijfoodmicro.2004.1 2.028 pmid: 15924999
23.        Bokhari SAI, Latif F, Rajoka MI. Purification and characterization of xylanases from Thermomyces lanuginosus and its mutant derivative possessing novel kinetic and thermodynamic properties. World J Microbiol Biotechnol. 2008;25(3):493-502. doi: 10.1007/s11274-008-9915-z
24.        Uyar F, Baysal Z. Production and optimization of process parameters for alkaline protease production by a newly isolated Bacillus sp. under solid state fermentation. Proc Biochem. 2004;39(12):1893-1898. doi: 10.1016/j.procbio.2003.09.016
25.        Souza PM, Werneck G, Aliakbarian B, Siqueira F, Ferreira Filho EX, Perego P, et al. Production, purification and characterization of an aspartic protease from Aspergillus foetidus. Food Chem Toxicol. 2017;109(Pt 2):1103-1110. doi: 10.1016/j.fct.2017.0 3.055 pmid: 28359876
26.        Wyder MT. Identification and characterization of the yeast flora in Kefyr and smear ripened cheese. Switzerland: Swiss Federal Institute of Technology; 1998.
27.        Ellaiah P, Srinivasulu B, Adinarayana K. A review on microbial alkaline proteases. J Sci Ind Res. 2002;61:690-704.
28.        Venugopal M, Saramma AV. Characterization of alkaline protease from Vibrio fluvialis strain VM10 isolated from a mangrove sediment sample and its application as a laundry detergent additive. Proc Biochem. 2006;41(6):1239-1243. doi: 10.1016/j.procb io.2005.12.025
29.        Deng A, Wu J, Zhang Y, Zhang G, Wen T. Purification and characterization of a surfactant-stable high-alkaline protease from Bacillus sp. B001. Bioresour Technol. 2010;101(18):7111-7117. doi: 10.1016/j.biortech.201 0.03.130 pmid: 20417096
30.        Gupta R, Beg QK, Lorenz P. Bacterial alkaline proteases: molecular approaches and industrial applications. Appl Microbiol Biotechnol. 2002;59(1):15-32. doi: 10.1007/s00253-002-0975-y pmid: 12073127
31.        Ma C, Ni X, Chi Z, Ma L, Gao L. Purification and characterization of an alkaline protease from the marine yeast Aureobasidium pullulans for bioactive peptide production from different sources. Mar Biotechnol (NY). 2007;9(3):343-351. doi: 10.1007/s10126-006-6105-6 pmid: 17345116
32.        Habbeche A, Saoudi B, Jaouadi B, Haberra S, Kerouaz B, Boudelaa M, et al. Purification and biochemical characterization of a detergent-stable keratinase from a newly thermophilic actinomycete Actinomadura keratinilytica strain Cpt29 isolated from poultry compost. J Biosci Bioeng. 2014;117(4):413-421. doi: 10.1016/j.jbiosc.2013.09.006 pmid: 24140106
33.        North M. Comparative biochemistry of the proteinases of eukaryotic microorganisms. Microbiol Rev. 1982;46:308-315.
34.        Raval VH, Pillai S, Rawal CM, Singh SP. Biochemical and structural characterization of a detergent-stable serine alkaline protease from seawater haloalkaliphilic bacteria. Proc Biochem. 2014;49(6):955-962. doi: 10.1016/j.procbio.2014.03.014
35.        Okamoto M, Yonejima Y, Tsujimoto Y, Suzuki Y, Watanabe Z. A thermostable collagenolytic protease with a very large molecular mass produced by thermophilic Bacillus sp. strain MO-1. Appl Microbiol Biotechnol. 2001;57(1-2):103-108. doi: 10.1007/s002 530100731
36.        Annamalai N, Rajeswari MV, Sahu SK, Balasubramanian T. Purification and characterization of solvent stable, alkaline protease from Bacillus firmus CAS 7 by microbial conversion of marine wastes and molecular mechanism underlying solvent stability. Proc Biochem. 2014;49(6):1012-1019. doi: 10.1016/j.procb io.2014.03.007
37.        Najafi MF, Deobagkar D, Deobagkar D. Potential application of protease isolated from Pseudomonas aeruginosa PD100. Electron J Biotechnol. 2005;8(2):197-203. doi: 10.2225/vol8-issue2-fulltext-5
38.        Beg QK, Gupta R. Purification and characterization of an oxidation-stable, thiol-dependent serine alkaline protease from Bacillus mojavensis. Enzyme Microb Technol. 2003;32(2):294-304. doi: 10.1016/s0141-0229(02)00293-4
39.        Mohammadian M, Farzampanah L, Behtash-oskouie A, Majdi S, Mohseni G, Imandar M, et al. A biosensor for detect nitrite (NO2-) and hydroxylamine (nh2oh) by using of hydroxylamine oxidase and modified electrode with ZnO nanoparticles. Int J Electrochem Sci. 2013;8(9):11215-11227.
40.        Ward OP, Moo-Young M. Thermostable enzymes. Biotechnol Adv. 1988;6(1):39-69. doi: 10.1016/0734-9750(88)90573-3 pmid: 14543441
41.          Muhammad A, Ali S, Bokhari I. Purification and characterization of extracellular lipase by Geotrichum candidum of dairy origin. Pak J Bot. 2017;49(2):757-761.